- Results

Long output form

The program predicts the following (9) proteasomal cleavages (made by human proteasome type III ) in pp_89 (25 amino acids):

Position	Amino acid	Cleavage prediction
1	R	non-cleavable area
2	L	non-cleavable area
3	M	non-cleavable area
4	Y	non-cleavable area
5	D	non-cleavable area
6	M	-
7	Y	++
8	P	-
9	H	-
10	F	+++
11	M	+++
12	P	+
13	T	-
14	N	++
15	L	+++
16	G	+
17	P	-
18	S	-
19	E	+
20	K	+
21	R	-
22	V	non-cleavable area
23	W	non-cleavable area
24	M	non-cleavable area
25	S	non-cleavable area

- : no cleavage behind this position, +,++,+++ : cleavage behind this position, with a hint for its strength (number of "+")
Non-cleavable area: the flanking window of this position reaches to the boundary of the sequence

Program version 1.0, Wed, 19. July 00 Back to the submission form